If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ), 'gf_id' => 'HOM05D000542', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000542' ), 'data_identifier' => 'HOM05D000542', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000542', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1010', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p39640' => 'bna', 'A06p03890' => 'bna', 'A06p36310' => 'bna', 'A07p00470' => 'bna', 'A08p04080' => 'bna', 'A09p06140' => 'bna', 'Aa31LG10G4630' => 'aar', 'Aa31LG10G4640' => 'aar', 'Aa31LG11G4660' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.1020' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1022' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.15' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2584' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.754' => 'aag', 'Actinidia00510' => 'ach', 'Actinidia12835' => 'ach', 'Actinidia14657' => 'ach', 'Actinidia14658' => 'ach', 'Actinidia14659' => 'ach', 'Actinidia14660' => 'ach', 'Actinidia15724' => 'ach', 'Actinidia27904' => 'ach', 'Ah.01g019510' => 'amhyb', 'Ah.01g019540' => 'amhyb', 'Ah.03g146850' => 'amhyb', 'Ah.03g146880' => 'amhyb', 'Ah.03g146960' => 'amhyb', 'Ah.08g211630' => 'amhyb', 'Ah.13g071970' => 'amhyb', 'Ah.14g080160' => 'amhyb', 'Ah.16g104250' => 'amhyb', 'Ah.16g105060' => 'amhyb', 'Ah.16g105070' => 'amhyb', 'Ah.16g105110' => 'amhyb', 'AL1G56190' => 'aly', 'AL1G56280' => 'aly', 'AL2G24760' => 'aly', 'AL6G37440' => 'aly', 'Aqoxy3G01233' => 'aox', 'Aqoxy3G03194' => 'aox', 'Aqoxy3G03197' => 'aox', 'Aqoxy6G01077' => 'aox', 'Aqoxy7G01674' => 'aox', 'Aqoxy7G01678' => 'aox', 'arahy.Tifrunner.gnm1.ann1.04D7UL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.39ZYJP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3I6GZV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.441Z8B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4W2UPU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5NV7Q1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7IPP4A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A0NHG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS7LHQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3263J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I67FLR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IP9R22' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KA310P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KXJ4AK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M1NAY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M4EJC3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NG4XB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P15414' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q70MCY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RL0B30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPMS6A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFLB02' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VT6DM9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XYEW5V' => 'arhy', 'AT1G49320' => 'ath', 'AT5G25610' => 'ath', 'ATR0315G045' => 'atr', 'ATR0733G029' => 'atr', 'ATR0733G043' => 'atr', 'ATR0733G049' => 'atr', 'ATR0733G098' => 'atr', 'ATR0733G106' => 'atr', 'ATR0733G111' => 'atr', 'ATR0733G152' => 'atr', 'ATR0733G247' => 'atr', 'ATR0733G258' => 'atr', 'ATR1126G020' => 'atr', 'ATR1126G043' => 'atr', 'ATR1147G023' => 'atr', 'ATR1147G038' => 'atr', 'Atru.chr5.2992' => 'acertr', 'Atru.chr5.2994' => 'acertr', 'Atru.chr7.2172' => 'acertr', 'Atru.chr7.2173' => 'acertr', 'Atru.chr7.2175' => 'acertr', 'Atru.chr7.2289' => 'acertr', 'Atru.chr7.2290' => 'acertr', 'Atru.chr7.2292' => 'acertr', 'AUR62003574' => 'cqu', 'AUR62003577' => 'cqu', 'AUR62003578' => 'cqu', 'AUR62003580' => 'cqu', 'AUR62005310' => 'cqu', 'AUR62006863' => 'cqu', 'AUR62009351' => 'cqu', 'AUR62009353' => 'cqu', 'AUR62009354' => 'cqu', 'AUR62009355' => 'cqu', 'AUR62009356' => 'cqu', 'AUR62011107' => 'cqu', 'AUR62011339' => 'cqu', 'AUR62011342' => 'cqu', 'AUR62011349' => 'cqu', 'AUR62011666' => 'cqu', 'AUR62013316' => 'cqu', 'AUR62016713' => 'cqu', 'AUR62016717' => 'cqu', 'AUR62016721' => 'cqu', 'AUR62017095' => 'cqu', 'AUR62017889' => 'cqu', 'AUR62017893' => 'cqu', 'AUR62018464' => 'cqu', 'AUR62023031' => 'cqu', 'AUR62023032' => 'cqu', 'AUR62023033' => 'cqu', 'AUR62023034' => 'cqu', 'AUR62023036' => 'cqu', 'AUR62023037' => 'cqu', 'AUR62023038' => 'cqu', 'AUR62026590' => 'cqu', 'AUR62032495' => 'cqu', 'AUR62036450' => 'cqu', 'AUR62043725' => 'cqu', 'AUR62043729' => 'cqu', 'AUR62044620' => 'cqu', 'BcaB02g11069' => 'bca', 'BcaB04g17351' => 'bca', 'BcaB04g19773' => 'bca', 'BcaB04g19775' => 'bca', 'BcaB04g19776' => 'bca', 'BcaB04g19778' => 'bca', 'BcaB04g19783' => 'bca', 'BcaB07g29988' => 'bca', 'BcaC03g17899' => 'bca', 'BcaC06g36705' => 'bca', 'BcaC07g37065' => 'bca', 'BcaC08g43130' => 'bca', 'BcaNung03931' => 'bca', 'BcaNung04845' => 'bca', 'BolC2t12005H' => 'bol', 'BolC6t35537H' => 'bol', 'BolC7t40527H' => 'bol', 'BolC7t44749H' => 'bol', 'BolC9t53598H' => 'bol', 'BraA02t08930Z' => 'bra', 'BraA06t23598Z' => 'bra', 'BraA06t26552Z' => 'bra', 'BraA07t27838Z' => 'bra', 'BraA09t36256Z' => 'bra', 'C02p59420' => 'bna', 'C06p04050' => 'bna', 'C07p00880' => 'bna', 'C07p42230' => 'bna', 'C08p04270' => 'bna', 'C09p06770' => 'bna', 'CAN.G1060.2' => 'can', 'CAN.G1060.4' => 'can', 'CAN.G149.42' => 'can', 'CAN.G186.49' => 'can', 'CAN.G194.14' => 'can', 'CAN.G274.2' => 'can', 'CAN.G274.3' => 'can', 'CAN.G291.6' => 'can', 'CAN.G291.9' => 'can', 'CAN.G322.119' => 'can', 'CAN.G322.123' => 'can', 'CAN.G322.125' => 'can', 'CAN.G39.26' => 'can', 'CAN.G66.4' => 'can', 'CAN.G680.17' => 'can', 'CAN.G680.19' => 'can', 'CAN.G787.15' => 'can', 'CAN.G787.21' => 'can', 'CAN.G787.22' => 'can', 'CAN.G787.23' => 'can', 'CAN.G787.24' => 'can', 'CAN.G787.25' => 'can', 'CANSAT01G2395' => 'cansat', 'CANSAT11G0457' => 'cansat', 'CANSAT11G0585' => 'cansat', 'CANSAT11G1682' => 'cansat', 'CANSAT25G3434' => 'cansat', 'CANSAT35G0422' => 'cansat', 'CANSAT54G0151' => 'cansat', 'CANSAT56G0239' => 'cansat', 'CANSAT62G0001' => 'cansat', 'CARHR039310' => 'chi', 'CARHR187720' => 'chi', 'CARHR187730' => 'chi', 'CARHR187740' => 'chi', 'Carub.0001s3850' => 'cru', 'Carub.0006s2348' => 'cru', 'Ca_05746_v3' => 'car', 'Ca_05747_v3' => 'car', 'Ca_05748_v3' => 'car', 'Ca_12263_v3' => 'car', 'Ca_12805_v3' => 'car', 'Ca_12817_v3' => 'car', 'Ca_15374_v3' => 'car', 'Ca_15375_v3' => 'car', 'Ca_15376_v3' => 'car', 'Ca_20858_v3' => 'car', 'Ca_20861_v3' => 'car', 'Ca_30482_v3' => 'car', 'Ca_30551_v3' => 'car', 'Ca_31237_v3' => 'car', 'Cc00_g22690' => 'ccan', 'Cc00_g24050' => 'ccan', 'Cc00_g24060' => 'ccan', 'Cc00_g26150' => 'ccan', 'Cc00_g27510' => 'ccan', 'Cc00_g29410' => 'ccan', 'Cc02_g17700' => 'ccan', 'Cc02_g17720' => 'ccan', 'Cc06_g18670' => 'ccan', 'Cc06_g18690' => 'ccan', 'Cc07_g14580' => 'ccan', 'Cc08_g08440' => 'ccan', 'Cc08_g08450' => 'ccan', 'Cc08_g08460' => 'ccan', 'Cc08_g08470' => 'ccan', 'Cc08_g08800' => 'ccan', 'Cc08_g08820' => 'ccan', 'Cc08_g08830' => 'ccan', 'Cc08_g08860' => 'ccan', 'Cc08_g08870' => 'ccan', 'Cc08_g08890' => 'ccan', 'Cc08_g08910' => 'ccan', 'Cc09_g09700' => 'ccan', 'CDE05G1146' => 'cde', 'Cfa005017' => 'cfa', 'Cfa005019' => 'cfa', 'Cfa007849' => 'cfa', 'Cfa007852' => 'cfa', 'Cfa007853' => 'cfa', 'Cfa013337' => 'cfa', 'Ciclev10008742m.g' => 'ccl', 'Ciclev10028994m.g' => 'ccl', 'Ciclev10029006m.g' => 'ccl', 'Ciclev10029053m.g' => 'ccl', 'Ciclev10029064m.g' => 'ccl', 'Ciclev10029954m.g' => 'ccl', 'Ciclev10030447m.g' => 'ccl', 'CiPaw.05G062900' => 'cil', 'CiPaw.05G063100' => 'cil', 'CiPaw.05G063300' => 'cil', 'CiPaw.05G063400' => 'cil', 'CiPaw.06G136600' => 'cil', 'CiPaw.07G207900' => 'cil', 'CiPaw.08G022900' => 'cil', 'ClCG02G005150' => 'cla', 'ClCG11G004500' => 'cla', 'ClCG11G013970' => 'cla', 'COL.COLO4_04120' => 'col', 'COL.COLO4_04121' => 'col', 'COL.COLO4_08248' => 'col', 'COL.COLO4_11792' => 'col', 'COL.COLO4_17855' => 'col', 'COL.COLO4_18704' => 'col', 'COL.COLO4_18705' => 'col', 'COL.COLO4_21242' => 'col', 'COL.COLO4_25914' => 'col', 'COL.COLO4_32436' => 'col', 'COL.COLO4_36491' => 'col', 'COL.COLO4_36492' => 'col', 'COL.COLO4_36493' => 'col', 'COL.COLO4_36495' => 'col', 'COL.COLO4_36496' => 'col', 'COL.COLO4_36497' => 'col', 'COL.COLO4_36498' => 'col', 'COL.COLO4_36505' => 'col', 'Cpa.g.sc205.1' => 'cpa', 'Cpa.g.sc62.131' => 'cpa', 'Cpa.g.sc62.133' => 'cpa', 'Cpa.g.sc62.135' => 'cpa', 'Cpa.g.sc62.136' => 'cpa', 'CsaV3_2G014600' => 'csa', 'CsaV3_2G014610' => 'csa', 'CsaV3_7G023440' => 'csa', 'CSS0001855' => 'camsi', 'CSS0015194' => 'camsi', 'CSS0019753' => 'camsi', 'CSS0020117' => 'camsi', 'CSS0024638' => 'camsi', 'CSS0026040' => 'camsi', 'CSS0026940' => 'camsi', 'CSS0030457' => 'camsi', 'CSS0032418' => 'camsi', 'CSS0038670' => 'camsi', 'CSS0039882' => 'camsi', 'CSS0046303' => 'camsi', 'DCAR_000738' => 'dca', 'DCAR_003606' => 'dca', 'DCAR_004246' => 'dca', 'DCAR_004505' => 'dca', 'DCAR_004507' => 'dca', 'DCAR_004509' => 'dca', 'DCAR_008848' => 'dca', 'DCAR_015557' => 'dca', 'DCAR_022111' => 'dca', 'DCAR_027510' => 'dca', 'DCAR_028993' => 'dca', 'Dinv14216' => 'din', 'Dinv14219' => 'din', 'Dinv23537' => 'din', 'Dinv23540' => 'din', 'Dinv30248' => 'din', 'Dinv42074' => 'din', 'Dinv42076' => 'din', 'Dinv42080' => 'din', 'Duzib052G0326' => 'dzi', 'Duzib052G0519' => 'dzi', 'Duzib129G0001' => 'dzi', 'Duzib132G0627' => 'dzi', 'Duzib132G1108' => 'dzi', 'Duzib132G1250' => 'dzi', 'Duzib133G1237' => 'dzi', 'Duzib150G0871' => 'dzi', 'Duzib168G1394' => 'dzi', 'Duzib170G0648' => 'dzi', 'Duzib170G0749' => 'dzi', 'Duzib248G1233' => 'dzi', 'ECA233G1716' => 'eca', 'ECA233G1799' => 'eca', 'ECA233G4799' => 'eca', 'ECA233G6163' => 'eca', 'ECA236G1757' => 'eca', 'ECA236G3762' => 'eca', 'ECA240G1730' => 'eca', 'ECA248G1613' => 'eca', 'ECA248G2527' => 'eca', 'ECA248G3573' => 'eca', 'ECA248G3861' => 'eca', 'EL10Ac1g01437' => 'bvu', 'EL10Ac2g04087' => 'bvu', 'EL10Ac2g04088' => 'bvu', 'EL10Ac2g04089' => 'bvu', 'EL10Ac2g04090' => 'bvu', 'EL10Ac3g06646' => 'bvu', 'EL10Ac4g07581' => 'bvu', 'EL10Ac4g07583' => 'bvu', 'EL10Ac6g13834' => 'bvu', 'EL10Ac8g18626' => 'bvu', 'EL10Ac8g18632' => 'bvu', 'EL10Ac8g18669' => 'bvu', 'EL10Ac8g18709' => 'bvu', 'EL10Ac9g21740' => 'bvu', 'EL10Ac9g21745' => 'bvu', 'EL10Ac9g22895' => 'bvu', 'EL10As7g23775' => 'bvu', 'Eucgr.C02887' => 'egr', 'Eucgr.I01260' => 'egr', 'FAN01G0080' => 'fan', 'FAN03G0882' => 'fan', 'FAN06G0958' => 'fan', 'FAN06G2207' => 'fan', 'FAN06G2915' => 'fan', 'FAN10G0632' => 'fan', 'FAN10G1458' => 'fan', 'FAN15G1534' => 'fan', 'FAN15G1897' => 'fan', 'FAN15G2010' => 'fan', 'FAN16G0698' => 'fan', 'FAN20G0120' => 'fan', 'FAN20G1357' => 'fan', 'FAN20G2023' => 'fan', 'FAN24G0233' => 'fan', 'FAN24G0561' => 'fan', 'FAN24G0899' => 'fan', 'FAN24G0974' => 'fan', 'FAN24G1718' => 'fan', 'FAN24G1871' => 'fan', 'FAN24G1982' => 'fan', 'FAN24G2548' => 'fan', 'FAN24G2825' => 'fan', 'FAN27G1094' => 'fan', 'FAN27G2567' => 'fan', 'FAN27G3093' => 'fan', 'FvH4_2g08480' => 'fve', 'FvH4_2g08490' => 'fve', 'FvH4_2g08510' => 'fve', 'FvH4_2g08530' => 'fve', 'FvH4_2g21762' => 'fve', 'FvH4_2g36250' => 'fve', 'FvH4_7g14680' => 'fve', 'Glyma.04G013500' => 'gma', 'Glyma.04G079600' => 'gma', 'Glyma.04G180400' => 'gma', 'Glyma.06G013400' => 'gma', 'Glyma.06G081050' => 'gma', 'Glyma.06G081100' => 'gma', 'Glyma.07G176700' => 'gma', 'Glyma.08G036600' => 'gma', 'Glyma.08G230600' => 'gma', 'Glyma.09G214800' => 'gma', 'Glyma.11G119100' => 'gma', 'Glyma.11G119900' => 'gma', 'Glyma.12G044600' => 'gma', 'Glyma.12G217300' => 'gma', 'Glyma.12G217400' => 'gma', 'Glyma.13G283900' => 'gma', 'Glyma.14G140900' => 'gma', 'Glyma.14G141000' => 'gma', 'Gohir.A03G212300' => 'ghi', 'Gohir.A03G212350' => 'ghi', 'Gohir.A04G121142' => 'ghi', 'Gohir.A05G048700' => 'ghi', 'Gohir.A05G048800' => 'ghi', 'Gohir.A05G070600' => 'ghi', 'Gohir.A05G070650' => 'ghi', 'Gohir.A05G070700' => 'ghi', 'Gohir.A07G107400' => 'ghi', 'Gohir.A08G010525' => 'ghi', 'Gohir.A08G010550' => 'ghi', 'Gohir.A08G010575' => 'ghi', 'Gohir.A08G010600' => 'ghi', 'Gohir.A08G065900' => 'ghi', 'Gohir.A10G185100' => 'ghi', 'Gohir.A13G048900' => 'ghi', 'Gohir.A13G217851' => 'ghi', 'Gohir.D02G233700' => 'ghi', 'Gohir.D02G233800' => 'ghi', 'Gohir.D04G164040' => 'ghi', 'Gohir.D04G164080' => 'ghi', 'Gohir.D05G050600' => 'ghi', 'Gohir.D05G050700' => 'ghi', 'Gohir.D05G073600' => 'ghi', 'Gohir.D05G073625' => 'ghi', 'Gohir.D05G073650' => 'ghi', 'Gohir.D05G073675' => 'ghi', 'Gohir.D07G111400' => 'ghi', 'Gohir.D08G020933' => 'ghi', 'Gohir.D08G020966' => 'ghi', 'Gohir.D08G074600' => 'ghi', 'Gohir.D10G192200' => 'ghi', 'Gohir.D13G047400' => 'ghi', 'Gohir.D13G221533' => 'ghi', 'Gorai.001G119700' => 'gra', 'Gorai.004G015400' => 'gra', 'Gorai.004G015500' => 'gra', 'Gorai.004G078900' => 'gra', 'Gorai.005G261700' => 'gra', 'Gorai.005G261800' => 'gra', 'Gorai.009G052100' => 'gra', 'Gorai.009G052200' => 'gra', 'Gorai.009G074500' => 'gra', 'Gorai.009G074600' => 'gra', 'Gorai.009G074700' => 'gra', 'Gorai.011G215100' => 'gra', 'Gorai.012G152100' => 'gra', 'Gorai.013G053000' => 'gra', 'Gorai.013G252700' => 'gra', 'GSVIVG01015390001' => 'vvi', 'GSVIVG01031942001' => 'vvi', 'GSVIVG01035679001' => 'vvi', 'GSVIVG01035680001' => 'vvi', 'GSVIVG01035682001' => 'vvi', 'GSVIVG01035686001' => 'vvi', 'GSVIVG01035693001' => 'vvi', 'GSVIVG01035702001' => 'vvi', 'GSVIVG01035703001' => 'vvi', 'GSVIVG01035705001' => 'vvi', 'HanXRQChr01g0029401' => 'han', 'HanXRQChr01g0029411' => 'han', 'HanXRQChr01g0029431' => 'han', 'HanXRQChr01g0029491' => 'han', 'HanXRQChr01g0029501' => 'han', 'HanXRQChr01g0029521' => 'han', 'HanXRQChr02g0048371' => 'han', 'HanXRQChr03g0082391' => 'han', 'HanXRQChr04g0127881' => 'han', 'HanXRQChr08g0216621' => 'han', 'HanXRQChr08g0216631' => 'han', 'HanXRQChr08g0216641' => 'han', 'HanXRQChr10g0313841' => 'han', 'HanXRQChr10g0313851' => 'han', 'HanXRQChr10g0314091' => 'han', 'HanXRQChr11g0351761' => 'han', 'HanXRQChr13g0420961' => 'han', 'HanXRQChr13g0424661' => 'han', 'HanXRQChr16g0504951' => 'han', 'HanXRQChr16g0505801' => 'han', 'Haze_02367' => 'cav', 'Haze_02368' => 'cav', 'Haze_02370' => 'cav', 'Haze_02371' => 'cav', 'Haze_06618' => 'cav', 'Haze_14216' => 'cav', 'Haze_14217' => 'cav', 'Haze_21829' => 'cav', 'Haze_21834' => 'cav', 'Haze_27523' => 'cav', 'Hma1.2p1_0003F.1_g003730' => 'hma', 'Hma1.2p1_0066F.1_g036520' => 'hma', 'Hma1.2p1_0066F.1_g036550' => 'hma', 'Hma1.2p1_0066F.1_g036565' => 'hma', 'Hma1.2p1_0066F.1_g036585' => 'hma', 'Hma1.2p1_0066F.1_g036600' => 'hma', 'Hma1.2p1_0140F.1_g063630' => 'hma', 'Hma1.2p1_0450F.1_g155650' => 'hma', 'HPP92_003937' => 'vpl', 'Hund00275' => 'sun', 'Hund00281' => 'sun', 'Hund00285' => 'sun', 'Hund03445' => 'sun', 'Hund19556' => 'sun', 'Hund23043' => 'sun', 'Lalb_Chr00c44g0412591' => 'lal', 'Lalb_Chr08g0243311' => 'lal', 'Lalb_Chr08g0246581' => 'lal', 'Lalb_Chr23g0265431' => 'lal', 'Lalb_Chr23g0265451' => 'lal', 'Lalb_Chr24g0402641' => 'lal', 'Lj1g0002852' => 'lja', 'Lj1g0004204' => 'lja', 'Lj1g0005370' => 'lja', 'Lj1g0008280' => 'lja', 'Lj1g0008771' => 'lja', 'Lj1g0018273' => 'lja', 'Lj1g0022571' => 'lja', 'Lj1g0023869' => 'lja', 'Lj3g0000376' => 'lja', 'Lj3g0007790' => 'lja', 'Lj3g0017004' => 'lja', 'Lj3g0017571' => 'lja', 'Lj3g0017729' => 'lja', 'Lj3g0026072' => 'lja', 'Lj4g0013613' => 'lja', 'Lj7C708T7' => 'lonja', 'Lj7P707T12' => 'lonja', 'Lj8A690T43' => 'lonja', 'Lj8A691G18' => 'lonja', 'Lj8A691T19' => 'lonja', 'Lj8A693G8' => 'lonja', 'Lj8C692T1' => 'lonja', 'Lj8C694T2' => 'lonja', 'Lj8C694T3' => 'lonja', 'Lj8P606T9' => 'lonja', 'Lj8P695T38' => 'lonja', 'Lj8P712T10' => 'lonja', 'Lj8P715T30' => 'lonja', 'Lj8P715T33' => 'lonja', 'Lj9C368T21' => 'lonja', 'Lj9P368T54' => 'lonja', 'Lsat_1_v5_gn_1_48880' => 'lsa', 'Lsat_1_v5_gn_1_48900' => 'lsa', 'Lsat_1_v5_gn_1_48980' => 'lsa', 'Lsat_1_v5_gn_1_49041' => 'lsa', 'Lsat_1_v5_gn_1_59360' => 'lsa', 'Lsat_1_v5_gn_6_11160' => 'lsa', 'Lsat_1_v5_gn_7_89600' => 'lsa', 'Lsat_1_v5_gn_9_109481' => 'lsa', 'Lsat_1_v5_gn_9_109501' => 'lsa', 'Lsat_1_v5_gn_9_90481' => 'lsa', 'Manes.03G020400' => 'mes', 'Manes.03G066380' => 'mes', 'Manes.03G125200' => 'mes', 'Manes.03G125551' => 'mes', 'Manes.03G125700' => 'mes', 'Manes.03G125800' => 'mes', 'Manes.03G126100' => 'mes', 'Manes.03G126301' => 'mes', 'Manes.03G128100' => 'mes', 'Manes.04G116100' => 'mes', 'Manes.04G116200' => 'mes', 'Manes.06G160100' => 'mes', 'Manes.06G160201' => 'mes', 'Manes.06G160333' => 'mes', 'Manes.06G160500' => 'mes', 'Manes.06G160701' => 'mes', 'Manes.06G160750' => 'mes', 'Manes.06G160800' => 'mes', 'Manes.06G160932' => 'mes', 'Manes.07G052466' => 'mes', 'Manes.07G053110' => 'mes', 'Manes.07G053754' => 'mes', 'Manes.07G098200' => 'mes', 'Manes.10G047800' => 'mes', 'Manes.11G089000' => 'mes', 'Manes.15G164700' => 'mes', 'Manes.16G066600' => 'mes', 'Manes.17G100000' => 'mes', 'MBI01_g41483_MAGBIO' => 'mbi', 'MBI04_g19380_MAGBIO' => 'mbi', 'MBI04_g22004_MAGBIO' => 'mbi', 'MBI16_g15414_MAGBIO' => 'mbi', 'MD04G1018200' => 'mdo', 'MD05G1066100' => 'mdo', 'MD05G1068000' => 'mdo', 'MD05G1068100' => 'mdo', 'MD08G1119600' => 'mdo', 'MD08G1119700' => 'mdo', 'MD08G1125700' => 'mdo', 'MD08G1199500' => 'mdo', 'MD08G1203300' => 'mdo', 'MD10G1077900' => 'mdo', 'MD10G1078000' => 'mdo', 'MD15G1098800' => 'mdo', 'MD15G1105500' => 'mdo', 'MD15G1219500' => 'mdo', 'Medtr0312s0030' => 'mtr', 'Medtr1g007520' => 'mtr', 'Medtr1g008420' => 'mtr', 'Medtr1g008450' => 'mtr', 'Medtr1g008460' => 'mtr', 'Medtr1g008470' => 'mtr', 'Medtr1g008500' => 'mtr', 'Medtr1g008510' => 'mtr', 'Medtr1g008530' => 'mtr', 'Medtr1g008560' => 'mtr', 'Medtr1g008580' => 'mtr', 'Medtr1g008590' => 'mtr', 'Medtr1g045860' => 'mtr', 'Medtr2g081590' => 'mtr', 'Medtr2g081610' => 'mtr', 'Medtr2g081770' => 'mtr', 'Medtr3g107830' => 'mtr', 'Medtr3g109490' => 'mtr', 'Medtr3g116270' => 'mtr', 'Medtr3g116320' => 'mtr', 'Medtr3g116380' => 'mtr', 'Medtr3g116410' => 'mtr', 'Medtr4g068420' => 'mtr', 'Medtr4g069040' => 'mtr', 'Medtr4g069520' => 'mtr', 'Medtr4g069540' => 'mtr', 'Medtr4g069550' => 'mtr', 'Medtr4g069570' => 'mtr', 'Medtr4g069680' => 'mtr', 'Medtr6g086530' => 'mtr', 'Medtr8g044290' => 'mtr', 'Medtr8g045880' => 'mtr', 'Medtr8g045890' => 'mtr', 'Medtr8g046000' => 'mtr', 'Medtr8g445140' => 'mtr', 'Medtr8g445170' => 'mtr', 'MELO3C003592.2' => 'cme', 'MELO3C003990.2' => 'cme', 'MELO3C004877.2' => 'cme', 'MELO3C012542.2' => 'cme', 'MELO3C020983.2' => 'cme', 'MELO3C020984.2' => 'cme', 'Migut.A00237' => 'egut', 'Migut.B00248' => 'egut', 'Migut.N01230' => 'egut', 'MSTRG.20091' => 'ama', 'MSTRG.20094' => 'ama', 'MSTRG.25897' => 'ama', 'MSTRG.27704' => 'ama', 'Nitab4.5_0000250g0250' => 'nta', 'Nitab4.5_0000250g0270' => 'nta', 'Nitab4.5_0000250g0280' => 'nta', 'Nitab4.5_0000250g0290' => 'nta', 'Nitab4.5_0001133g0020' => 'nta', 'Nitab4.5_0001133g0030' => 'nta', 'Nitab4.5_0001133g0040' => 'nta', 'Nitab4.5_0001337g0010' => 'nta', 'Nitab4.5_0001337g0040' => 'nta', 'Nitab4.5_0001337g0060' => 'nta', 'Nitab4.5_0001403g0020' => 'nta', 'Nitab4.5_0001794g0080' => 'nta', 'Nitab4.5_0001794g0130' => 'nta', 'Nitab4.5_0008809g0030' => 'nta', 'Nitab4.5_0009466g0030' => 'nta', 'Nitab4.5_0011008g0010' => 'nta', 'Nn2g15834' => 'nnu', 'Nn5g27662' => 'nnu', 'Nn5g27664' => 'nnu', 'Nn5g27671' => 'nnu', 'Nn5g27672' => 'nnu', 'Nn7g35886' => 'nnu', 'Oeu014339.1' => 'oeu', 'Oeu014340.1' => 'oeu', 'Oeu014343.1' => 'oeu', 'Oeu015978.1' => 'oeu', 'Oeu020766.1' => 'oeu', 'Oeu027032.1' => 'oeu', 'Oeu027034.1' => 'oeu', 'Oeu027036.1' => 'oeu', 'Os01g0733500' => 'osa', 'Os02g0288600' => 'osa', 'Os02g0289000' => 'osa', 'Os04g0225700' => 'osa', 'Os05g0215000' => 'osa', 'Os05g0215066' => 'osa', 'Os05g0217700' => 'osa', 'Os05g0217800' => 'osa', 'Os05g0221900' => 'osa', 'Os06g0240050' => 'osa', 'Os06g0281800' => 'osa', 'Os06g0302650' => 'osa', 'Os08g0496800' => 'osa', 'Os09g0481000' => 'osa', 'Os11g0170900' => 'osa', 'Peaxi162Scf00016g00087' => 'pax', 'Peaxi162Scf00016g00930' => 'pax', 'Peaxi162Scf00105g00026' => 'pax', 'Peaxi162Scf00105g00037' => 'pax', 'Peaxi162Scf00105g00041' => 'pax', 'Peaxi162Scf00105g00313' => 'pax', 'Peaxi162Scf00110g00146' => 'pax', 'Peaxi162Scf00276g00093' => 'pax', 'Peaxi162Scf00799g00311' => 'pax', 'Peaxi162Scf00799g00412' => 'pax', 'Peaxi162Scf00799g00518' => 'pax', 'Peaxi162Scf02157g00002' => 'pax', 'PGR004G0464' => 'pgr', 'PGR044G1623' => 'pgr', 'PGR102G0410' => 'pgr', 'PGR142G0428' => 'pgr', 'PGR142G2518' => 'pgr', 'PGSC0003DMG400012008' => 'stu', 'PGSC0003DMG400014509' => 'stu', 'PGSC0003DMG400015052' => 'stu', 'PGSC0003DMG400015054' => 'stu', 'PGSC0003DMG400019937' => 'stu', 'PGSC0003DMG400025172' => 'stu', 'PGSC0003DMG400025191' => 'stu', 'PGSC0003DMG400025192' => 'stu', 'PGSC0003DMG400025193' => 'stu', 'PGSC0003DMG400025194' => 'stu', 'PGSC0003DMG400029214' => 'stu', 'PGSC0003DMG400032289' => 'stu', 'PGSC0003DMG400034395' => 'stu', 'PGSC0003DMG400042760' => 'stu', 'PGSC0003DMG400047074' => 'stu', 'Phvul.008G158600' => 'pvu', 'Phvul.009G024400' => 'pvu', 'Phvul.009G024700' => 'pvu', 'Phvul.009G105300' => 'pvu', 'Phvul.009G180600' => 'pvu', 'Phvul.011G046300' => 'pvu', 'Phvul.011G182200' => 'pvu', 'Potri.004G136000' => 'ptr', 'Potri.004G136900' => 'ptr', 'Potri.004G153100' => 'ptr', 'Potri.006G243600' => 'ptr', 'Potri.006G243700' => 'ptr', 'Potri.007G115600' => 'ptr', 'Potri.009G114300' => 'ptr', 'Potri.009G114600' => 'ptr', 'Potri.018G036700' => 'ptr', 'Potri.T012400' => 'ptr', 'Potri.T012500' => 'ptr', 'Potri.T012700' => 'ptr', 'Pp3c17_6510' => 'ppa', 'Pp3c2_17520' => 'ppa', 'Prupe.1G453500' => 'ppe', 'Prupe.1G453600' => 'ppe', 'Prupe.1G453700' => 'ppe', 'Prupe.1G453800' => 'ppe', 'Prupe.1G465600' => 'ppe', 'Prupe.1G475100' => 'ppe', 'Prupe.1G475200' => 'ppe', 'Prupe.1G475300' => 'ppe', 'Prupe.1G475400' => 'ppe', 'Prupe.1G475500' => 'ppe', 'Prupe.1G475800' => 'ppe', 'Prupe.1G475900' => 'ppe', 'Prupe.1G476200' => 'ppe', 'Prupe.1G476500' => 'ppe', 'Prupe.1G476700' => 'ppe', 'Prupe.1G477000' => 'ppe', 'Prupe.1G477200' => 'ppe', 'Prupe.1G477400' => 'ppe', 'Prupe.1G477800' => 'ppe', 'Prupe.4G169000' => 'ppe', 'Prupe.4G257600' => 'ppe', 'Prupe.8G098700' => 'ppe', 'Prupe.8G098900' => 'ppe', 'Prupe.8G099700' => 'ppe', 'Prupe.8G099900' => 'ppe', 'Prupe.8G100000' => 'ppe', 'Psat0s198g0040' => 'psa', 'Psat0s198g0080' => 'psa', 'Psat0s4403g0040' => 'psa', 'Psat0s5368g0040' => 'psa', 'Psat0s5597g0040' => 'psa', 'Psat0s691g0040' => 'psa', 'Psat2g048320' => 'psa', 'Psat2g048360' => 'psa', 'Psat2g069800' => 'psa', 'Psat3g189000' => 'psa', 'Psat4g180960' => 'psa', 'Psat4g181120' => 'psa', 'Psat4g181320' => 'psa', 'Psat4g181400' => 'psa', 'Psat4g181440' => 'psa', 'Psat4g181600' => 'psa', 'Psat4g181680' => 'psa', 'Psat4g181720' => 'psa', 'Psat4g185360' => 'psa', 'Psat4g186960' => 'psa', 'Psat4g189400' => 'psa', 'Psat4g221080' => 'psa', 'Psat5g007520' => 'psa', 'Psat5g007720' => 'psa', 'Psat5g007760' => 'psa', 'Psat5g008080' => 'psa', 'Psat5g008360' => 'psa', 'Psat6g033920' => 'psa', 'Psat6g033960' => 'psa', 'Psat6g034000' => 'psa', 'Psat7g045280' => 'psa', 'Psat7g141640' => 'psa', 'Psat7g141920' => 'psa', 'Psat7g142040' => 'psa', 'PSO198G0076' => 'pso', 'PSO349G0085' => 'pso', 'PSO349G0101' => 'pso', 'PSO349G0116' => 'pso', 'PSO349G0153' => 'pso', 'PSO349G0211' => 'pso', 'PSO349G0321' => 'pso', 'PSO765G0058' => 'pso', 'PSO765G0175' => 'pso', 'PSO765G0201' => 'pso', 'PSO765G0236' => 'pso', 'PSO782G1829' => 'pso', 'PSO782G5471' => 'pso', 'PSO832G1436' => 'pso', 'QL01p017908' => 'qlo', 'QL01p017921' => 'qlo', 'QL11p042625' => 'qlo', 'QL11p043155' => 'qlo', 'QL11p043188' => 'qlo', 'QL11p043294' => 'qlo', 'QL12p026208' => 'qlo', 'RcHm_v2.0_Chr1g0356161' => 'rch', 'RcHm_v2.0_Chr1g0356461' => 'rch', 'RcHm_v2.0_Chr5g0051031' => 'rch', 'RcHm_v2.0_Chr6g0263821' => 'rch', 'RcHm_v2.0_Chr6g0263861' => 'rch', 'RcHm_v2.0_Chr6g0263891' => 'rch', 'Rhsim05G0074900' => 'rsi', 'Rhsim07G0154100' => 'rsi', 'Rhsim11G0174700' => 'rsi', 'Rhsim11G0175000' => 'rsi', 'Rhsim11G0175300' => 'rsi', 'Rhsim11G0175500' => 'rsi', 'Rhsim11G0175700' => 'rsi', 'Sabra04G0081900' => 'sbr', 'Sabra06G0190800' => 'sbr', 'Sabra09G0087700' => 'sbr', 'Sabra09G0087800' => 'sbr', 'Sabra11G0083500' => 'sbr', 'Sabra18G0037200' => 'sbr', 'Sabra18G0037300' => 'sbr', 'Sabra19G0001600' => 'sbr', 'Sabra19G0011100' => 'sbr', 'Sabra19G0011200' => 'sbr', 'SabraUnG0003800' => 'sbr', 'SalBow3G1355' => 'sbo', 'SalBow4G2992' => 'sbo', 'SalBow6G5032' => 'sbo', 'SalBow6G6229' => 'sbo', 'Sc08g0000430' => 'sci', 'Sc09g0009010' => 'sci', 'Sc09g0009050' => 'sci', 'Sc18g0004590' => 'sci', 'Sc23g0005880' => 'sci', 'Sc23g0005890' => 'sci', 'Sed0000459' => 'sed', 'Sed0010077' => 'sed', 'Sed0010841' => 'sed', 'Sed0027124' => 'sed', 'Sed0027903' => 'sed', 'SEGI_00506' => 'sgi', 'SEGI_12028' => 'sgi', 'SEGI_13214' => 'sgi', 'SEGI_15221' => 'sgi', 'SEGI_15477' => 'sgi', 'SEGI_22330' => 'sgi', 'SEGI_23182' => 'sgi', 'SEGI_30414' => 'sgi', 'SEGI_37241' => 'sgi', 'SGA_v2.0_scaffold13G06557' => 'sas', 'SGA_v2.0_scaffold243G44299' => 'sas', 'SGA_v2.0_scaffold58G20548' => 'sas', 'Solyc01g109470.3' => 'sly', 'Solyc01g109500.4' => 'sly', 'Solyc02g062300.3' => 'sly', 'Solyc02g062310.1' => 'sly', 'Solyc02g062313.1' => 'sly', 'Solyc02g062317.1' => 'sly', 'Solyc02g062320.3' => 'sly', 'Solyc05g015300.4' => 'sly', 'Solyc08g068130.1' => 'sly', 'Solyc08g068140.4' => 'sly', 'Solyc08g068150.4' => 'sly', 'Sopen01g051660' => 'spe', 'Sopen01g051690' => 'spe', 'Sopen02g013270' => 'spe', 'Sopen02g013300' => 'spe', 'Sopen02g013310' => 'spe', 'Sopen05g010530' => 'spe', 'Sopen08g022000' => 'spe', 'Sopen08g022010' => 'spe', 'Sp2g21920' => 'spa', 'SpUn0227_0020' => 'spa', 'TAR383G0864' => 'tar', 'TAR624G0279' => 'tar', 'TAR624G0341' => 'tar', 'TAR624G1414' => 'tar', 'TAR628G0639' => 'tar', 'TAR628G1303' => 'tar', 'THA.LOC104799209' => 'tha', 'THA.LOC104804726' => 'tha', 'THA.LOC104806078' => 'tha', 'Thecc.02G037500' => 'tca', 'Thecc.02G037600' => 'tca', 'Thecc.02G086900' => 'tca', 'Thecc.04G121300' => 'tca', 'Thecc.09G038700' => 'tca', 'Thecc.09G038800' => 'tca', 'Thecc.09G242200' => 'tca', 'Thecc.09G242300' => 'tca', 'Thecc.09G242400' => 'tca', 'Thecc.09G242600' => 'tca', 'Thecc.09G242700' => 'tca', 'Thecc.09G242900' => 'tca', 'Thhalv10004736m.g' => 'esa', 'Thhalv10005719m.g' => 'esa', 'Thhalv10011703m.g' => 'esa', 'TPR.G11980' => 'tpr', 'TPR.G11983' => 'tpr', 'TPR.G11990' => 'tpr', 'TPR.G11992' => 'tpr', 'TPR.G12007' => 'tpr', 'TPR.G12028' => 'tpr', 'TPR.G12091' => 'tpr', 'TPR.G12105' => 'tpr', 'TPR.G12113' => 'tpr', 'TPR.G12129' => 'tpr', 'TPR.G1345' => 'tpr', 'TPR.G18705' => 'tpr', 'TPR.G20462' => 'tpr', 'TPR.G24485' => 'tpr', 'TPR.G27336' => 'tpr', 'TPR.G28253' => 'tpr', 'TPR.G30261' => 'tpr', 'TPR.G30527' => 'tpr', 'TPR.G33142' => 'tpr', 'TPR.G36569' => 'tpr', 'TPR.G36570' => 'tpr', 'TPR.G38105' => 'tpr', 'TPR.G38222' => 'tpr', 'TPR.G38231' => 'tpr', 'TPR.G38240' => 'tpr', 'TPR.G657' => 'tpr', 'TPR.G9162' => 'tpr', 'TPR.G918' => 'tpr', 'TPR.G9181' => 'tpr', 'TPR.G9184' => 'tpr', 'TWI12G0126' => 'twi', 'TWI12G0994' => 'twi', 'TWI32G1221' => 'twi', 'TWI34G1032' => 'twi', 'TWI34G1828' => 'twi', 'TWI38G0743' => 'twi', 'TWI38G1687' => 'twi', 'TWI38G1769' => 'twi', 'TWI39G0117' => 'twi', 'TWI39G0430' => 'twi', 'TWI39G0474' => 'twi', 'TWI39G0922' => 'twi', 'TWI39G1171' => 'twi', 'TWI59G0263' => 'twi', 'TWI59G1463' => 'twi', 'TWI63G0293' => 'twi', 'TWI75G0539' => 'twi', 'TWI79G0593' => 'twi', 'TWI79G1639' => 'twi', 'unitig_37.g12220' => 'ugi', 'unitig_699.g19876' => 'ugi', 'unitig_748.g8216' => 'ugi', 'vmacro02119' => 'vma', 'vmacro02124' => 'vma', 'vmacro02125' => 'vma', 'vmacro05355' => 'vma', 'vmacro05356' => 'vma', 'vmacro17187' => 'vma', 'vmacro17499' => 'vma', 'vmacro17501' => 'vma', 'vmacro22207' => 'vma', 'vmacro22208' => 'vma', 'vmacro23258' => 'vma', 'vmacro23259' => 'vma', 'VMungo0899G0001' => 'vmu', 'VMungo1127G0132' => 'vmu', 'VMungo1127G1835' => 'vmu', 'VMungo1127G2251' => 'vmu', 'VMungo1309G0525' => 'vmu', 'VMungo1309G0906' => 'vmu', 'VMungo1309G1230' => 'vmu', 'VMungo1309G1325' => 'vmu', 'VMungo1309G2113' => 'vmu', 'VMungo1309G3152' => 'vmu', 'Zm00001eb031240' => 'zma', 'Zm00001eb033930' => 'zma', 'Zm00001eb039010' => 'zma', 'Zm00001eb154060' => 'zma', 'Zm00001eb300370' => 'zma', 'Zm00001eb300470' => 'zma', 'Zm00001eb316270' => 'zma', 'Zm00001eb371370' => 'zma' ) $gf_id = 'HOM05D000542' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000542' ) $data_identifier = 'HOM05D000542' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 12, 'aar' => (int) 3, 'aag' => (int) 5, 'ach' => (int) 8, 'amhyb' => (int) 12, 'aly' => (int) 4, 'aox' => (int) 6, 'arhy' => (int) 24, 'ath' => (int) 2, 'atr' => (int) 14, 'acertr' => (int) 8, 'cqu' => (int) 37, 'bca' => (int) 14, 'bol' => (int) 5, 'bra' => (int) 5, 'can' => (int) 22, 'cansat' => (int) 9, 'chi' => (int) 4, 'cru' => (int) 2, 'car' => (int) 14, 'ccan' => (int) 23, 'cde' => (int) 1, 'cfa' => (int) 6, 'ccl' => (int) 7, 'cil' => (int) 7, 'cla' => (int) 3, 'col' => (int) 18, 'cpa' => (int) 5, 'csa' => (int) 3, 'camsi' => (int) 12, 'dca' => (int) 11, 'din' => (int) 8, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 17, 'egr' => (int) 2, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 15, 'vvi' => (int) 10, 'han' => (int) 20, 'cav' => (int) 10, 'hma' => (int) 8, 'vpl' => (int) 1, 'sun' => (int) 6, 'lal' => (int) 6, 'lja' => (int) 15, 'lonja' => (int) 16, 'lsa' => (int) 10, 'mes' => (int) 28, 'mbi' => (int) 4, 'mdo' => (int) 14, 'mtr' => (int) 36, 'cme' => (int) 6, 'egut' => (int) 3, 'ama' => (int) 4, 'nta' => (int) 16, 'nnu' => (int) 6, 'oeu' => (int) 8, 'osa' => (int) 15, 'pax' => (int) 12, 'pgr' => (int) 5, 'stu' => (int) 15, 'pvu' => (int) 7, 'ptr' => (int) 12, 'ppa' => (int) 2, 'ppe' => (int) 26, 'psa' => (int) 34, 'pso' => (int) 14, 'qlo' => (int) 7, 'rch' => (int) 6, 'rsi' => (int) 7, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 5, 'sgi' => (int) 9, 'sas' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 8, 'spa' => (int) 2, 'tar' => (int) 6, 'tha' => (int) 3, 'tca' => (int) 12, 'esa' => (int) 3, 'tpr' => (int) 30, 'twi' => (int) 19, 'ugi' => (int) 3, 'vma' => (int) 12, 'vmu' => (int) 10, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371370' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1